Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 AC006449.5-201ENST00000610658 2098 ntBASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 AC010240.3-201ENST00000607688 395 ntBASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 AC092666.2-201ENST00000613287 246 ntBASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.3□□□□□ -0.12
RCL1Q9Y2P8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 RNF216P1-203ENST00000404404 2427 ntBASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 AL513477.1-201ENST00000602865 2407 ntBASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 AC103702.1-201ENST00000548801 2630 ntBASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 AC078925.2-201ENST00000624013 1973 ntBASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RCL1Q9Y2P8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCL1Q9Y2P8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms