Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 AC136632.2-201ENST00000512891 861 ntBASIC16.41■□□□□ 0.22
CTSFQ9UBX1 UNC93B6-202ENST00000528242 690 ntBASIC16.41■□□□□ 0.22
CTSFQ9UBX1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 AC034105.1-201ENST00000563488 319 ntBASIC16.41■□□□□ 0.22
CTSFQ9UBX1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 AC004706.3-202ENST00000621574 984 ntBASIC16.41■□□□□ 0.22
CTSFQ9UBX1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 AC006116.8-202ENST00000587620 1550 ntBASIC16.41■□□□□ 0.22
CTSFQ9UBX1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.41■□□□□ 0.22
CTSFQ9UBX1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 AC097637.2-201ENST00000624096 1997 ntBASIC16.4■□□□□ 0.22
CTSFQ9UBX1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 AC006504.4-201ENST00000592118 1568 ntBASIC16.4■□□□□ 0.22
CTSFQ9UBX1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 AC023511.2-201ENST00000618803 211 ntBASIC16.4■□□□□ 0.22
CTSFQ9UBX1 AC005593.1-201ENST00000624894 515 ntBASIC16.4■□□□□ 0.22
CTSFQ9UBX1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.4■□□□□ 0.22
CTSFQ9UBX1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CTSFQ9UBX1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 LINC00304-203ENST00000565008 1864 ntBASIC16.39■□□□□ 0.21
CTSFQ9UBX1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTSFQ9UBX1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 292.6 ms