Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 BTBD6P1-201ENST00000412176 1267 ntBASIC16■□□□□ 0.15
CHD8Q9HCK8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16■□□□□ 0.15
CHD8Q9HCK8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 AC244093.1-201ENST00000610837 814 ntBASIC16■□□□□ 0.15
CHD8Q9HCK8 AC007431.3-201ENST00000623221 587 ntBASIC16■□□□□ 0.15
CHD8Q9HCK8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CHD8Q9HCK8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16■□□□□ 0.15
CHD8Q9HCK8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CHD8Q9HCK8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CHD8Q9HCK8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16■□□□□ 0.15
CHD8Q9HCK8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16■□□□□ 0.15
CHD8Q9HCK8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16■□□□□ 0.15
CHD8Q9HCK8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16■□□□□ 0.15
CHD8Q9HCK8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16■□□□□ 0.15
CHD8Q9HCK8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16■□□□□ 0.15
CHD8Q9HCK8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16■□□□□ 0.15
CHD8Q9HCK8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16■□□□□ 0.15
CHD8Q9HCK8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHD8Q9HCK8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 SLC25A6P2-201ENST00000497974 877 ntBASIC15.98■□□□□ 0.15
CHD8Q9HCK8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 MPRIPP1-201ENST00000452433 1089 ntBASIC15.98■□□□□ 0.15
CHD8Q9HCK8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHD8Q9HCK8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 AC109635.5-201ENST00000533593 962 ntBASIC15.97■□□□□ 0.15
CHD8Q9HCK8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms