Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 RN7SL606P-201ENST00000472779 293 ntBASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 AL592071.1-201ENST00000611956 408 ntBASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 AC124864.1-201ENST00000623408 392 ntBASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 AC125634.1-201ENST00000438758 1403 ntBASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 AC093525.9-201ENST00000624961 1746 ntBASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LRTM1Q9HBL6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRTM1Q9HBL6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRTM1Q9HBL6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRTM1Q9HBL6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRTM1Q9HBL6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRTM1Q9HBL6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.77■□□□□ 0.27
LRTM1Q9HBL6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
LRTM1Q9HBL6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRTM1Q9HBL6 AC106886.4-201ENST00000623557 2502 ntBASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 LINC02012-201ENST00000608206 1725 ntBASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 CROCCP1-201ENST00000426910 5675 ntBASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 SLC25A1P3-201ENST00000395415 828 ntBASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 DUX4L26-201ENST00000489078 1255 ntBASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRTM1Q9HBL6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms