Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3FQ9H1D9 AC090340.1-201ENST00000620778 4980 ntBASIC19.19■□□□□ 0.66
POLR3FQ9H1D9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3FQ9H1D9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR3FQ9H1D9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.19■□□□□ 0.66
POLR3FQ9H1D9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3FQ9H1D9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3FQ9H1D9 AC006504.4-201ENST00000592118 1568 ntBASIC19.19■□□□□ 0.66
POLR3FQ9H1D9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3FQ9H1D9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 AC073621.1-201ENST00000392730 636 ntBASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 AL356488.2-201ENST00000602755 427 ntBASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 AC117500.6-201ENST00000624871 588 ntBASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3FQ9H1D9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 IGHV3-22-201ENST00000520721 359 ntBASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 AL353135.1-201ENST00000606729 504 ntBASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 MIR1199-201ENST00000621445 119 ntBASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3FQ9H1D9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 AC136632.2-201ENST00000512891 861 ntBASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3FQ9H1D9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR3FQ9H1D9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms