Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SCAF11Q99590 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SCAF11Q99590 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC24.82■■□□□ 1.56
SCAF11Q99590 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCAF11Q99590 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
SCAF11Q99590 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCAF11Q99590 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC24.82■■□□□ 1.56
SCAF11Q99590 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCAF11Q99590 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCAF11Q99590 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCAF11Q99590 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCAF11Q99590 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
SCAF11Q99590 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC24.82■■□□□ 1.56
SCAF11Q99590 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC24.82■■□□□ 1.56
SCAF11Q99590 AC140878.1-201ENST00000565277 250 ntBASIC24.82■■□□□ 1.56
SCAF11Q99590 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCAF11Q99590 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC24.82■■□□□ 1.56
SCAF11Q99590 FO538757.1-201ENST00000623083 1397 ntBASIC24.82■■□□□ 1.56
SCAF11Q99590 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC24.82■■□□□ 1.56
SCAF11Q99590 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCAF11Q99590 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCAF11Q99590 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
SCAF11Q99590 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCAF11Q99590 ABALON-201ENST00000629058 1903 ntBASIC24.81■■□□□ 1.56
SCAF11Q99590 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC24.81■■□□□ 1.56
SCAF11Q99590 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC24.81■■□□□ 1.56
SCAF11Q99590 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SCAF11Q99590 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC24.81■■□□□ 1.56
SCAF11Q99590 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SCAF11Q99590 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCAF11Q99590 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SCAF11Q99590 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
SCAF11Q99590 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCAF11Q99590 AL592309.1-201ENST00000443127 649 ntBASIC24.81■■□□□ 1.56
SCAF11Q99590 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC24.81■■□□□ 1.56
SCAF11Q99590 AC002558.1-201ENST00000488906 803 ntBASIC24.81■■□□□ 1.56
SCAF11Q99590 IGHV3-52-201ENST00000519770 353 ntBASIC24.81■■□□□ 1.56
SCAF11Q99590 BAD-207ENST00000544785 525 ntTSL 3 BASIC24.81■■□□□ 1.56
SCAF11Q99590 AL135744.1-201ENST00000565098 629 ntBASIC24.81■■□□□ 1.56
SCAF11Q99590 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC24.81■■□□□ 1.56
SCAF11Q99590 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCAF11Q99590 AL390754.1-201ENST00000619088 582 ntBASIC24.81■■□□□ 1.56
SCAF11Q99590 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC24.81■■□□□ 1.56
SCAF11Q99590 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
SCAF11Q99590 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCAF11Q99590 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC24.81■■□□□ 1.56
SCAF11Q99590 AL354751.1-201ENST00000412768 1863 ntBASIC24.81■■□□□ 1.56
SCAF11Q99590 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF11Q99590 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF11Q99590 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC24.8■■□□□ 1.56
SCAF11Q99590 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF11Q99590 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF11Q99590 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF11Q99590 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC24.8■■□□□ 1.56
SCAF11Q99590 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF11Q99590 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC24.8■■□□□ 1.56
SCAF11Q99590 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF11Q99590 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC24.8■■□□□ 1.56
SCAF11Q99590 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCAF11Q99590 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SCAF11Q99590 TREML5P-201ENST00000421694 576 ntBASIC24.8■■□□□ 1.56
SCAF11Q99590 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC24.8■■□□□ 1.56
SCAF11Q99590 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SCAF11Q99590 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC24.8■■□□□ 1.56
SCAF11Q99590 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC24.8■■□□□ 1.56
SCAF11Q99590 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC24.79■■□□□ 1.56
SCAF11Q99590 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC24.79■■□□□ 1.56
SCAF11Q99590 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC24.79■■□□□ 1.56
SCAF11Q99590 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC24.79■■□□□ 1.56
SCAF11Q99590 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 SLC25A6P2-201ENST00000497974 877 ntBASIC24.79■■□□□ 1.56
SCAF11Q99590 SLC25A39P2-201ENST00000537614 270 ntBASIC24.79■■□□□ 1.56
SCAF11Q99590 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC24.79■■□□□ 1.56
SCAF11Q99590 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC24.79■■□□□ 1.56
SCAF11Q99590 INO80E-210ENST00000567705 880 ntTSL 3 BASIC24.79■■□□□ 1.56
SCAF11Q99590 COX11-202ENST00000571584 1108 ntTSL 2 BASIC24.79■■□□□ 1.56
SCAF11Q99590 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC24.79■■□□□ 1.56
SCAF11Q99590 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC24.79■■□□□ 1.56
SCAF11Q99590 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC24.79■■□□□ 1.56
SCAF11Q99590 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
SCAF11Q99590 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
SCAF11Q99590 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC24.79■■□□□ 1.56
SCAF11Q99590 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC24.79■■□□□ 1.56
SCAF11Q99590 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCAF11Q99590 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SCAF11Q99590 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SCAF11Q99590 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SCAF11Q99590 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC24.78■■□□□ 1.56
SCAF11Q99590 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SCAF11Q99590 HNRNPA1P40-201ENST00000426371 1278 ntBASIC24.78■■□□□ 1.56
SCAF11Q99590 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms