Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 SPDYE21P-201ENST00000413323 827 ntBASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 AC132008.2-207ENST00000454517 770 ntBASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 AC148477.5-201ENST00000625164 1645 ntBASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSPG4P5Q96PW8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
CSPG4P5Q96PW8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CSPG4P5Q96PW8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CSPG4P5Q96PW8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CSPG4P5Q96PW8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CSPG4P5Q96PW8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.46
CSPG4P5Q96PW8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
CSPG4P5Q96PW8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CSPG4P5Q96PW8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 AP001269.4-201ENST00000609611 512 ntBASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 AL732292.2-201ENST00000609649 430 ntBASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSPG4P5Q96PW8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSPG4P5Q96PW8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms