Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 AL139424.1-201ENST00000607572 797 ntBASIC23.29■■□□□ 1.32
CFAP53Q96M91 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CFAP53Q96M91 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CFAP53Q96M91 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC23.29■■□□□ 1.32
CFAP53Q96M91 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFAP53Q96M91 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFAP53Q96M91 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFAP53Q96M91 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP53Q96M91 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP53Q96M91 AC243591.1-201ENST00000452967 1364 ntBASIC23.28■■□□□ 1.32
CFAP53Q96M91 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CFAP53Q96M91 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CFAP53Q96M91 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC23.28■■□□□ 1.32
CFAP53Q96M91 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP53Q96M91 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP53Q96M91 KRT18P27-201ENST00000427733 1299 ntBASIC23.28■■□□□ 1.32
CFAP53Q96M91 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP53Q96M91 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP53Q96M91 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.28■■□□□ 1.32
CFAP53Q96M91 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.28■■□□□ 1.32
CFAP53Q96M91 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.28■■□□□ 1.32
CFAP53Q96M91 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP53Q96M91 AC116407.3-201ENST00000623905 1129 ntBASIC23.28■■□□□ 1.32
CFAP53Q96M91 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP53Q96M91 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP53Q96M91 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP53Q96M91 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP53Q96M91 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CFAP53Q96M91 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP53Q96M91 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP53Q96M91 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
CFAP53Q96M91 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
CFAP53Q96M91 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CFAP53Q96M91 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP53Q96M91 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP53Q96M91 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP53Q96M91 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP53Q96M91 ARTN-206ENST00000472435 402 ntTSL 3 BASIC23.27■■□□□ 1.32
CFAP53Q96M91 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.27■■□□□ 1.32
CFAP53Q96M91 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP53Q96M91 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC23.27■■□□□ 1.32
CFAP53Q96M91 AL353135.1-201ENST00000606729 504 ntBASIC23.27■■□□□ 1.32
CFAP53Q96M91 MIR1199-201ENST00000621445 119 ntBASIC23.27■■□□□ 1.32
CFAP53Q96M91 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.27■■□□□ 1.32
CFAP53Q96M91 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP53Q96M91 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CFAP53Q96M91 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP53Q96M91 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP53Q96M91 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
CFAP53Q96M91 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP53Q96M91 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC23.27■■□□□ 1.32
CFAP53Q96M91 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CFAP53Q96M91 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP53Q96M91 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP53Q96M91 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP53Q96M91 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP53Q96M91 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP53Q96M91 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP53Q96M91 AP002414.3-201ENST00000589352 1468 ntBASIC23.26■■□□□ 1.31
CFAP53Q96M91 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 AL590627.1-203ENST00000421194 1026 ntBASIC23.26■■□□□ 1.31
CFAP53Q96M91 AC092910.1-201ENST00000482027 1129 ntBASIC23.26■■□□□ 1.31
CFAP53Q96M91 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 RPS29-206ENST00000557111 488 ntTSL 2 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 BX640515.1-201ENST00000617215 977 ntBASIC23.26■■□□□ 1.31
CFAP53Q96M91 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP53Q96M91 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP53Q96M91 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP53Q96M91 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CFAP53Q96M91 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
CFAP53Q96M91 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.25■■□□□ 1.31
CFAP53Q96M91 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.25■■□□□ 1.31
CFAP53Q96M91 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC23.25■■□□□ 1.31
CFAP53Q96M91 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC23.25■■□□□ 1.31
CFAP53Q96M91 ELK2BP-201ENST00000415014 1224 ntBASIC23.25■■□□□ 1.31
CFAP53Q96M91 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC23.25■■□□□ 1.31
CFAP53Q96M91 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.25■■□□□ 1.31
CFAP53Q96M91 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 AC136632.2-201ENST00000512891 861 ntBASIC23.25■■□□□ 1.31
CFAP53Q96M91 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 ETFA-208ENST00000559602 792 ntTSL 3 BASIC23.25■■□□□ 1.31
CFAP53Q96M91 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC23.25■■□□□ 1.31
CFAP53Q96M91 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC23.25■■□□□ 1.31
CFAP53Q96M91 IL9RP2-201ENST00000423948 1312 ntBASIC23.25■■□□□ 1.31
CFAP53Q96M91 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms