Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP6Q96FZ7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 B3GAT3P1-201ENST00000471720 806 ntBASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 AC011506.1-201ENST00000474329 610 ntBASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 FSCN1P1-201ENST00000568912 1481 ntBASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 LINC02012-201ENST00000608206 1725 ntBASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP6Q96FZ7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 KRT8P7-201ENST00000533003 1432 ntBASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 RPS2P55-201ENST00000397318 883 ntBASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 AC107956.1-201ENST00000494359 873 ntBASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 SLC25A1P4-201ENST00000567977 778 ntBASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 AC130371.2-201ENST00000619443 611 ntBASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHMP6Q96FZ7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP6Q96FZ7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
CHMP6Q96FZ7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP6Q96FZ7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP6Q96FZ7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.58■□□□□ 0.41
CHMP6Q96FZ7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP6Q96FZ7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 DDX43P3-201ENST00000441064 443 ntBASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 AL355355.2-201ENST00000442321 338 ntBASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms