Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 KRT8P10-201ENST00000450021 1447 ntBASIC18.45■□□□□ 0.54
TRIM11Q96F44 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM11Q96F44 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM11Q96F44 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 KRT18P1-202ENST00000452408 1331 ntBASIC18.44■□□□□ 0.54
TRIM11Q96F44 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM11Q96F44 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM11Q96F44 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.44■□□□□ 0.54
TRIM11Q96F44 AC009053.2-201ENST00000563701 2365 ntBASIC18.44■□□□□ 0.54
TRIM11Q96F44 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 AC003669.1-201ENST00000334569 611 ntBASIC18.43■□□□□ 0.54
TRIM11Q96F44 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 DRAXINP1-201ENST00000437611 948 ntBASIC18.43■□□□□ 0.54
TRIM11Q96F44 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 AC087388.1-201ENST00000571370 1112 ntBASIC18.43■□□□□ 0.54
TRIM11Q96F44 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM11Q96F44 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM11Q96F44 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 AC233702.3-201ENST00000578656 1387 ntBASIC18.42■□□□□ 0.54
TRIM11Q96F44 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms