Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 AC096633.1-201ENST00000422446 749 ntBASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 SLC25A6P4-201ENST00000586535 553 ntBASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 MTDHP3-201ENST00000594186 672 ntBASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.3■□□□□ 0.36
SH3KBP1Q96B97 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 AP005117.1-201ENST00000584346 1413 ntBASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 LINC00896-202ENST00000609602 2128 ntBASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH3KBP1Q96B97 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 KRT18P67-201ENST00000432816 1264 ntBASIC17.28■□□□□ 0.36
SH3KBP1Q96B97 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms