Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 LINC00982-205ENST00000420957 435 ntBASIC18.74■□□□□ 0.59
BEST2Q8NFU1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 AC098831.1-202ENST00000438821 336 ntBASIC18.74■□□□□ 0.59
BEST2Q8NFU1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 IGHV3-22-201ENST00000520721 359 ntBASIC18.74■□□□□ 0.59
BEST2Q8NFU1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 AL356488.2-201ENST00000602755 427 ntBASIC18.74■□□□□ 0.59
BEST2Q8NFU1 AL139424.1-201ENST00000607572 797 ntBASIC18.74■□□□□ 0.59
BEST2Q8NFU1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.73■□□□□ 0.59
BEST2Q8NFU1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 AC136632.2-201ENST00000512891 861 ntBASIC18.73■□□□□ 0.59
BEST2Q8NFU1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 PGM5P2-202ENST00000637225 1043 ntBASIC18.73■□□□□ 0.59
BEST2Q8NFU1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 AC018470.1-201ENST00000624790 3129 ntBASIC18.73■□□□□ 0.59
BEST2Q8NFU1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BEST2Q8NFU1 AL135999.2-201ENST00000622438 1686 ntBASIC18.73■□□□□ 0.59
BEST2Q8NFU1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 AC073621.1-201ENST00000392730 636 ntBASIC18.72■□□□□ 0.59
BEST2Q8NFU1 ACTG1P4-201ENST00000425123 1122 ntBASIC18.72■□□□□ 0.59
BEST2Q8NFU1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 RPL13AP23-201ENST00000480739 586 ntBASIC18.72■□□□□ 0.59
BEST2Q8NFU1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 AC145285.3-201ENST00000564603 959 ntBASIC18.72■□□□□ 0.59
BEST2Q8NFU1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 AC005593.1-201ENST00000624894 515 ntBASIC18.72■□□□□ 0.59
BEST2Q8NFU1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms