Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 GPAT2P1-201ENST00000444924 1672 ntBASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 AC097658.1-201ENST00000475555 843 ntBASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 SOX15-203ENST00000570788 1093 ntBASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CROCCP3Q8IVE0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
CROCCP3Q8IVE0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CROCCP3Q8IVE0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CROCCP3Q8IVE0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CROCCP3Q8IVE0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CROCCP3Q8IVE0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CROCCP3Q8IVE0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CROCCP3Q8IVE0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CROCCP3Q8IVE0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CROCCP3Q8IVE0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 AC131212.4-201ENST00000623606 975 ntBASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 AC009102.3-201ENST00000623118 1491 ntBASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CROCCP3Q8IVE0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 CICP13-201ENST00000422015 2789 ntBASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.82■□□□□ 0.12
CROCCP3Q8IVE0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms