Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 LINC02012-201ENST00000608206 1725 ntBASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 MIR149-201ENST00000384879 89 ntBASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD2Q8IV50 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD2Q8IV50 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 FAM45BP-202ENST00000592932 1624 ntBASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 NIFKP9-201ENST00000419265 221 ntBASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 AC133041.1-202ENST00000642053 222 ntBASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 AL163051.1-201ENST00000569214 1512 ntBASIC15.33■□□□□ 0.04
LYSMD2Q8IV50 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD2Q8IV50 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms