Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 KLF4P1-201ENST00000412782 1185 ntBASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 EMBP1-201ENST00000458200 901 ntBASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD3Q7Z3D4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 PP12613-201ENST00000424958 2230 ntBASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 AC003669.1-201ENST00000334569 611 ntBASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 RBM17P3-201ENST00000417687 1192 ntBASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 AF238378.1-201ENST00000526806 358 ntBASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 MTDHP3-201ENST00000594186 672 ntBASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 AC008608.2-201ENST00000606089 416 ntBASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD3Q7Z3D4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD3Q7Z3D4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD3Q7Z3D4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD3Q7Z3D4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD3Q7Z3D4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD3Q7Z3D4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 STK19B-204ENST00000512515 211 ntBASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 AL355877.3-201ENST00000622820 899 ntBASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 AL138688.1-201ENST00000624851 1594 ntBASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms