Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 KRT18P41-201ENST00000518924 1277 ntBASIC15.27■□□□□ 0.04
C11orf88Q6PI97 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 AL445228.2-201ENST00000605589 952 ntBASIC15.27■□□□□ 0.04
C11orf88Q6PI97 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C11orf88Q6PI97 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 AC073508.3-201ENST00000619697 1419 ntBASIC15.26■□□□□ 0.03
C11orf88Q6PI97 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 AL391005.1-201ENST00000623953 2435 ntBASIC15.26■□□□□ 0.03
C11orf88Q6PI97 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 BX664615.1-201ENST00000443558 458 ntBASIC15.26■□□□□ 0.03
C11orf88Q6PI97 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 AC010653.2-201ENST00000623505 997 ntBASIC15.26■□□□□ 0.03
C11orf88Q6PI97 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
C11orf88Q6PI97 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 KRT18P35-201ENST00000510488 1269 ntBASIC15.25■□□□□ 0.03
C11orf88Q6PI97 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 DOC2GP-204ENST00000639052 2548 ntBASIC15.25■□□□□ 0.03
C11orf88Q6PI97 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms