Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 AL121912.1-201ENST00000603683 238 ntBASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 AC008608.2-201ENST00000606089 416 ntBASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 AL355877.3-201ENST00000622820 899 ntBASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 AL023806.1-201ENST00000603994 1649 ntBASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 AC080080.1-201ENST00000625121 2420 ntBASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 AP001269.4-201ENST00000609611 512 ntBASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TTC39BQ5VTQ0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 AP005117.1-201ENST00000584346 1413 ntBASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 PCDHA12-202ENST00000613593 2588 ntBASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 AL121894.2-201ENST00000602977 491 ntBASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 AD001527.2-201ENST00000622994 785 ntBASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.17■□□□□ 0.5
TTC39BQ5VTQ0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 SCARNA2-201ENST00000458748 420 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms