Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 INTS4P1-201ENST00000438455 1935 ntBASIC18.1■□□□□ 0.49
LRRC38Q5VT99 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC38Q5VT99 AC092053.1-201ENST00000605787 1936 ntBASIC18.1■□□□□ 0.49
LRRC38Q5VT99 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 KRT17P6-201ENST00000453795 1220 ntBASIC18.09■□□□□ 0.49
LRRC38Q5VT99 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
LRRC38Q5VT99 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC38Q5VT99 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC38Q5VT99 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC38Q5VT99 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC38Q5VT99 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC38Q5VT99 AC106886.4-201ENST00000623557 2502 ntBASIC18.08■□□□□ 0.49
LRRC38Q5VT99 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC38Q5VT99 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC38Q5VT99 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.08■□□□□ 0.49
LRRC38Q5VT99 IER3-202ENST00000376377 1350 ntBASIC18.08■□□□□ 0.49
LRRC38Q5VT99 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.08■□□□□ 0.49
LRRC38Q5VT99 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 IGHV3-47-201ENST00000425060 335 ntBASIC18.08■□□□□ 0.48
LRRC38Q5VT99 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 BNIP3P18-201ENST00000593976 575 ntBASIC18.08■□□□□ 0.48
LRRC38Q5VT99 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC38Q5VT99 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 AC105020.1-201ENST00000435356 2205 ntBASIC18.07■□□□□ 0.48
LRRC38Q5VT99 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 KLF4P1-201ENST00000412782 1185 ntBASIC18.07■□□□□ 0.48
LRRC38Q5VT99 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 AP002414.4-201ENST00000589764 1148 ntBASIC18.07■□□□□ 0.48
LRRC38Q5VT99 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 AC073592.5-201ENST00000624854 528 ntBASIC18.07■□□□□ 0.48
LRRC38Q5VT99 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 NSUN5P1-202ENST00000421140 1535 ntBASIC18.07■□□□□ 0.48
LRRC38Q5VT99 NSUN5P2-203ENST00000457352 1529 ntBASIC18.07■□□□□ 0.48
LRRC38Q5VT99 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC38Q5VT99 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LRRC38Q5VT99 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms