Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RFX7Q2KHR2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RFX7Q2KHR2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 KRT18P3-201ENST00000451602 1288 ntBASIC20.99■□□□□ 0.95
RFX7Q2KHR2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 AL139424.1-201ENST00000607572 797 ntBASIC20.99■□□□□ 0.95
RFX7Q2KHR2 AC004706.3-202ENST00000621574 984 ntBASIC20.99■□□□□ 0.95
RFX7Q2KHR2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RFX7Q2KHR2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 AC007967.2-201ENST00000432613 625 ntBASIC20.98■□□□□ 0.95
RFX7Q2KHR2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX7Q2KHR2 YBX2P1-201ENST00000394192 760 ntBASIC20.97■□□□□ 0.95
RFX7Q2KHR2 GPX1P2-201ENST00000429271 606 ntBASIC20.97■□□□□ 0.95
RFX7Q2KHR2 AC108751.1-201ENST00000490852 363 ntBASIC20.97■□□□□ 0.95
RFX7Q2KHR2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.97■□□□□ 0.95
RFX7Q2KHR2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX7Q2KHR2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms