Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 OR7E47P-204ENST00000575924 449 ntBASIC18.94■□□□□ 0.62
CDC42EP1Q00587 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 AC079781.4-201ENST00000641908 219 ntBASIC18.94■□□□□ 0.62
CDC42EP1Q00587 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42EP1Q00587 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 AC129492.6-201ENST00000611383 1305 ntBASIC18.93■□□□□ 0.62
CDC42EP1Q00587 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 AC012317.2-201ENST00000623305 2251 ntBASIC18.93■□□□□ 0.62
CDC42EP1Q00587 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.93■□□□□ 0.62
CDC42EP1Q00587 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 IGLL3P-201ENST00000412472 434 ntBASIC18.92■□□□□ 0.62
CDC42EP1Q00587 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 AC010327.4-202ENST00000591484 748 ntBASIC18.92■□□□□ 0.62
CDC42EP1Q00587 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 AL355312.1-201ENST00000407115 2176 ntBASIC18.92■□□□□ 0.62
CDC42EP1Q00587 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42EP1Q00587 AC016396.2-201ENST00000562575 1417 ntBASIC18.91■□□□□ 0.62
CDC42EP1Q00587 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 CXCL1P1-201ENST00000502804 216 ntBASIC18.91■□□□□ 0.62
CDC42EP1Q00587 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 AC005829.1-201ENST00000570002 483 ntBASIC18.91■□□□□ 0.62
CDC42EP1Q00587 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.91■□□□□ 0.62
CDC42EP1Q00587 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms