Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC116407.2-201ENST00000613639 860 ntBASIC16.53■□□□□ 0.24
GABREP78334 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 PI4KAP1-204ENST00000612579 1703 ntBASIC16.53■□□□□ 0.24
GABREP78334 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.53■□□□□ 0.24
GABREP78334 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 AC009113.1-201ENST00000570267 2443 ntBASIC16.53■□□□□ 0.24
GABREP78334 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.53■□□□□ 0.24
GABREP78334 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GABREP78334 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GABREP78334 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.52■□□□□ 0.24
GABREP78334 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
GABREP78334 AC009336.1-201ENST00000608941 1553 ntBASIC16.52■□□□□ 0.24
GABREP78334 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GABREP78334 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.52■□□□□ 0.24
GABREP78334 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GABREP78334 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GABREP78334 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GABREP78334 FAM86GP-201ENST00000448322 971 ntBASIC16.52■□□□□ 0.24
GABREP78334 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.52■□□□□ 0.24
GABREP78334 AC023141.5-201ENST00000458585 616 ntBASIC16.52■□□□□ 0.24
GABREP78334 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GABREP78334 CXCL1P1-201ENST00000502804 216 ntBASIC16.52■□□□□ 0.24
GABREP78334 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.52■□□□□ 0.24
GABREP78334 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.52■□□□□ 0.24
GABREP78334 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.52■□□□□ 0.24
GABREP78334 REXO1L3P-201ENST00000622202 1288 ntBASIC16.52■□□□□ 0.24
GABREP78334 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GABREP78334 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GABREP78334 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GABREP78334 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GABREP78334 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GABREP78334 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
GABREP78334 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
GABREP78334 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GABREP78334 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.52■□□□□ 0.23
GABREP78334 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GABREP78334 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GABREP78334 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GABREP78334 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 NEFHP1-201ENST00000412845 2629 ntBASIC16.51■□□□□ 0.23
GABREP78334 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.51■□□□□ 0.23
GABREP78334 BX276092.7-203ENST00000637198 1536 ntBASIC16.51■□□□□ 0.23
GABREP78334 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GABREP78334 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GABREP78334 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.51■□□□□ 0.23
GABREP78334 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.51■□□□□ 0.23
GABREP78334 HLA-J-203ENST00000494367 1087 ntBASIC16.51■□□□□ 0.23
GABREP78334 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.51■□□□□ 0.23
GABREP78334 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.51■□□□□ 0.23
GABREP78334 AC022145.2-201ENST00000598203 171 ntBASIC16.51■□□□□ 0.23
GABREP78334 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.51■□□□□ 0.23
GABREP78334 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.51■□□□□ 0.23
GABREP78334 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.51■□□□□ 0.23
GABREP78334 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.51■□□□□ 0.23
GABREP78334 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.51■□□□□ 0.23
GABREP78334 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.51■□□□□ 0.23
GABREP78334 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
GABREP78334 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GABREP78334 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
GABREP78334 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.5■□□□□ 0.23
GABREP78334 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.5■□□□□ 0.23
GABREP78334 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.5■□□□□ 0.23
GABREP78334 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms