Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.81■□□□□ 0.44
CDH4P55283 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CDH4P55283 AC116407.3-201ENST00000623905 1129 ntBASIC17.81■□□□□ 0.44
CDH4P55283 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CDH4P55283 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH4P55283 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH4P55283 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH4P55283 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 AC243591.1-201ENST00000452967 1364 ntBASIC17.8■□□□□ 0.44
CDH4P55283 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
CDH4P55283 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CDH4P55283 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH4P55283 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDH4P55283 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH4P55283 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH4P55283 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH4P55283 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH4P55283 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH4P55283 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH4P55283 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH4P55283 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 AL353135.1-201ENST00000606729 504 ntBASIC17.8■□□□□ 0.44
CDH4P55283 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH4P55283 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CDH4P55283 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH4P55283 AC016396.2-201ENST00000562575 1417 ntBASIC17.8■□□□□ 0.44
CDH4P55283 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH4P55283 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CDH4P55283 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH4P55283 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH4P55283 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH4P55283 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDH4P55283 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH4P55283 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH4P55283 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH4P55283 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH4P55283 AC073621.1-201ENST00000392730 636 ntBASIC17.79■□□□□ 0.44
CDH4P55283 AC092910.1-201ENST00000482027 1129 ntBASIC17.79■□□□□ 0.44
CDH4P55283 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH4P55283 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.79■□□□□ 0.44
CDH4P55283 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CDH4P55283 BX640515.1-201ENST00000617215 977 ntBASIC17.79■□□□□ 0.44
CDH4P55283 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.79■□□□□ 0.44
CDH4P55283 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH4P55283 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH4P55283 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.78■□□□□ 0.44
CDH4P55283 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH4P55283 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH4P55283 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH4P55283 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.78■□□□□ 0.44
CDH4P55283 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH4P55283 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 AL590627.1-203ENST00000421194 1026 ntBASIC17.78■□□□□ 0.44
CDH4P55283 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH4P55283 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH4P55283 AC136632.2-201ENST00000512891 861 ntBASIC17.78■□□□□ 0.44
CDH4P55283 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH4P55283 AL356488.2-201ENST00000602755 427 ntBASIC17.78■□□□□ 0.44
CDH4P55283 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH4P55283 MIR1199-201ENST00000621445 119 ntBASIC17.78■□□□□ 0.44
CDH4P55283 PGM5P2-202ENST00000637225 1043 ntBASIC17.78■□□□□ 0.44
CDH4P55283 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDH4P55283 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH4P55283 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH4P55283 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDH4P55283 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDH4P55283 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDH4P55283 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH4P55283 LINC00896-202ENST00000609602 2128 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms