Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
EPHB4P54760 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 AC012313.1-201ENST00000593393 3059 ntBASIC19.6■□□□□ 0.73
EPHB4P54760 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.6■□□□□ 0.73
EPHB4P54760 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 AC134043.2-201ENST00000624206 2238 ntBASIC19.6■□□□□ 0.73
EPHB4P54760 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
EPHB4P54760 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 AC004817.3-201ENST00000602957 2129 ntBASIC19.6■□□□□ 0.73
EPHB4P54760 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
EPHB4P54760 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
EPHB4P54760 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.6■□□□□ 0.73
EPHB4P54760 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.6■□□□□ 0.73
EPHB4P54760 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.6■□□□□ 0.73
EPHB4P54760 AC239800.4-201ENST00000603712 296 ntBASIC19.6■□□□□ 0.73
EPHB4P54760 AC005593.1-201ENST00000624894 515 ntBASIC19.6■□□□□ 0.73
EPHB4P54760 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.6■□□□□ 0.73
EPHB4P54760 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
EPHB4P54760 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.6■□□□□ 0.73
EPHB4P54760 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.6■□□□□ 0.73
EPHB4P54760 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.6■□□□□ 0.73
EPHB4P54760 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.6■□□□□ 0.73
EPHB4P54760 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.6■□□□□ 0.73
EPHB4P54760 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
EPHB4P54760 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB4P54760 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
EPHB4P54760 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
EPHB4P54760 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
EPHB4P54760 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.59■□□□□ 0.73
EPHB4P54760 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
EPHB4P54760 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.59■□□□□ 0.73
EPHB4P54760 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.59■□□□□ 0.73
EPHB4P54760 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHB4P54760 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
EPHB4P54760 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.59■□□□□ 0.73
EPHB4P54760 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
EPHB4P54760 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
EPHB4P54760 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
EPHB4P54760 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.59■□□□□ 0.73
EPHB4P54760 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHB4P54760 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.59■□□□□ 0.73
EPHB4P54760 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB4P54760 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB4P54760 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB4P54760 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.58■□□□□ 0.73
EPHB4P54760 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.58■□□□□ 0.73
EPHB4P54760 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB4P54760 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB4P54760 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
EPHB4P54760 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.58■□□□□ 0.73
EPHB4P54760 BCL2-203ENST00000589955 5011 ntBASIC19.58■□□□□ 0.73
EPHB4P54760 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB4P54760 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB4P54760 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.58■□□□□ 0.72
EPHB4P54760 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.58■□□□□ 0.72
EPHB4P54760 AC244107.1-201ENST00000442033 332 ntBASIC19.58■□□□□ 0.72
EPHB4P54760 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.58■□□□□ 0.72
EPHB4P54760 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB4P54760 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB4P54760 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.58■□□□□ 0.72
EPHB4P54760 MIR1199-201ENST00000621445 119 ntBASIC19.58■□□□□ 0.72
EPHB4P54760 C20orf181-201ENST00000623918 480 ntBASIC19.58■□□□□ 0.72
EPHB4P54760 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
EPHB4P54760 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB4P54760 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms