Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 AC051619.7-201ENST00000568314 623 ntBASIC22.07■■□□□ 1.12
ATP6V1AP38606 AC138649.4-201ENST00000612222 287 ntBASIC22.07■■□□□ 1.12
ATP6V1AP38606 AL645728.2-201ENST00000641974 660 ntBASIC22.07■■□□□ 1.12
ATP6V1AP38606 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V1AP38606 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V1AP38606 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.07■■□□□ 1.12
ATP6V1AP38606 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 KRT18P32-201ENST00000424695 1287 ntBASIC22.06■■□□□ 1.12
ATP6V1AP38606 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 AF228730.6-201ENST00000641497 218 ntBASIC22.06■■□□□ 1.12
ATP6V1AP38606 AC084121.3-201ENST00000641716 218 ntBASIC22.06■■□□□ 1.12
ATP6V1AP38606 AC105233.6-201ENST00000642093 218 ntBASIC22.06■■□□□ 1.12
ATP6V1AP38606 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 KRT18P55-202ENST00000578578 1546 ntBASIC22.06■■□□□ 1.12
ATP6V1AP38606 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V1AP38606 BSG-215ENST00000618006 1329 ntTSL 2 BASIC22.06■■□□□ 1.12
ATP6V1AP38606 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V1AP38606 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.05■■□□□ 1.12
ATP6V1AP38606 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V1AP38606 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V1AP38606 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V1AP38606 AC015922.1-201ENST00000421102 1152 ntBASIC22.05■■□□□ 1.12
ATP6V1AP38606 RN7SL589P-201ENST00000481268 310 ntBASIC22.05■■□□□ 1.12
ATP6V1AP38606 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.05■■□□□ 1.12
ATP6V1AP38606 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC22.05■■□□□ 1.12
ATP6V1AP38606 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC22.05■■□□□ 1.12
ATP6V1AP38606 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V1AP38606 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V1AP38606 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC22.05■■□□□ 1.12
ATP6V1AP38606 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
ATP6V1AP38606 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
ATP6V1AP38606 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
ATP6V1AP38606 TUBB3P1-201ENST00000405796 1332 ntBASIC22.05■■□□□ 1.12
ATP6V1AP38606 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC22.04■■□□□ 1.12
ATP6V1AP38606 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.04■■□□□ 1.12
ATP6V1AP38606 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
ATP6V1AP38606 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.04■■□□□ 1.12
ATP6V1AP38606 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.04■■□□□ 1.12
ATP6V1AP38606 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 MIR943-201ENST00000401286 94 ntBASIC22.04■■□□□ 1.12
ATP6V1AP38606 BASP1P1-201ENST00000430708 665 ntBASIC22.04■■□□□ 1.12
ATP6V1AP38606 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC22.04■■□□□ 1.12
ATP6V1AP38606 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC22.04■■□□□ 1.12
ATP6V1AP38606 AC107918.2-201ENST00000530817 355 ntBASIC22.04■■□□□ 1.12
ATP6V1AP38606 AL512356.2-201ENST00000546955 174 ntBASIC22.04■■□□□ 1.12
ATP6V1AP38606 TSFM-210ENST00000550559 897 ntTSL 5 BASIC22.04■■□□□ 1.12
ATP6V1AP38606 AL135744.1-201ENST00000565098 629 ntBASIC22.04■■□□□ 1.12
ATP6V1AP38606 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC22.04■■□□□ 1.12
ATP6V1AP38606 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 REXO1L11P-201ENST00000620964 1927 ntBASIC22.04■■□□□ 1.12
ATP6V1AP38606 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V1AP38606 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
ATP6V1AP38606 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.03■■□□□ 1.12
ATP6V1AP38606 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
ATP6V1AP38606 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V1AP38606 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
ATP6V1AP38606 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V1AP38606 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V1AP38606 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 AC236430.1-201ENST00000402231 743 ntBASIC22.03■■□□□ 1.12
ATP6V1AP38606 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.03■■□□□ 1.12
ATP6V1AP38606 GPS2P2-201ENST00000430745 888 ntBASIC22.03■■□□□ 1.12
ATP6V1AP38606 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V1AP38606 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms