Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LAMA1P25391 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LAMA1P25391 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.91■□□□□ 0.3
LAMA1P25391 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.91■□□□□ 0.3
LAMA1P25391 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.91■□□□□ 0.3
LAMA1P25391 AC097493.3-201ENST00000509725 367 ntBASIC16.91■□□□□ 0.3
LAMA1P25391 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.91■□□□□ 0.3
LAMA1P25391 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.91■□□□□ 0.3
LAMA1P25391 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LAMA1P25391 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LAMA1P25391 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LAMA1P25391 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LAMA1P25391 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.91■□□□□ 0.3
LAMA1P25391 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 NME2P1-201ENST00000426182 414 ntBASIC16.91■□□□□ 0.3
LAMA1P25391 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.91■□□□□ 0.3
LAMA1P25391 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LAMA1P25391 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.91■□□□□ 0.3
LAMA1P25391 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LAMA1P25391 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LAMA1P25391 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
LAMA1P25391 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LAMA1P25391 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.9■□□□□ 0.3
LAMA1P25391 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.9■□□□□ 0.3
LAMA1P25391 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LAMA1P25391 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.9■□□□□ 0.3
LAMA1P25391 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.9■□□□□ 0.3
LAMA1P25391 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.9■□□□□ 0.3
LAMA1P25391 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.9■□□□□ 0.3
LAMA1P25391 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LAMA1P25391 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LAMA1P25391 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 TREML5P-201ENST00000421694 576 ntBASIC16.9■□□□□ 0.3
LAMA1P25391 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.9■□□□□ 0.3
LAMA1P25391 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.9■□□□□ 0.3
LAMA1P25391 AC125807.1-201ENST00000483097 614 ntBASIC16.9■□□□□ 0.3
LAMA1P25391 AC112191.1-201ENST00000523689 701 ntBASIC16.9■□□□□ 0.3
LAMA1P25391 AC004408.2-201ENST00000623613 2777 ntBASIC16.9■□□□□ 0.3
LAMA1P25391 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.9■□□□□ 0.3
LAMA1P25391 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.9■□□□□ 0.3
LAMA1P25391 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 AC003669.1-201ENST00000334569 611 ntBASIC16.9■□□□□ 0.3
LAMA1P25391 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.9■□□□□ 0.3
LAMA1P25391 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.9■□□□□ 0.3
LAMA1P25391 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LAMA1P25391 AC067863.1-201ENST00000494933 530 ntBASIC16.9■□□□□ 0.3
LAMA1P25391 AL596325.1-201ENST00000563991 1082 ntBASIC16.9■□□□□ 0.3
LAMA1P25391 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.9■□□□□ 0.3
LAMA1P25391 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.9■□□□□ 0.3
LAMA1P25391 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LAMA1P25391 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
LAMA1P25391 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LAMA1P25391 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.89■□□□□ 0.3
LAMA1P25391 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
LAMA1P25391 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
LAMA1P25391 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LAMA1P25391 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.89■□□□□ 0.29
LAMA1P25391 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.89■□□□□ 0.29
LAMA1P25391 CXCL1P1-201ENST00000502804 216 ntBASIC16.89■□□□□ 0.29
LAMA1P25391 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 MIR6752-201ENST00000618442 71 ntBASIC16.89■□□□□ 0.29
LAMA1P25391 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LAMA1P25391 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LAMA1P25391 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LAMA1P25391 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LAMA1P25391 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LAMA1P25391 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LAMA1P25391 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 AC107890.1-201ENST00000422478 521 ntBASIC16.89■□□□□ 0.29
LAMA1P25391 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LAMA1P25391 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.89■□□□□ 0.29
LAMA1P25391 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LAMA1P25391 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms