Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB4AP20338 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB4AP20338 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB4AP20338 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
RAB4AP20338 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 KRT8P41-201ENST00000533985 1514 ntBASIC13.4□□□□□ -0.26
RAB4AP20338 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 AL603756.1-201ENST00000606511 2163 ntBASIC13.4□□□□□ -0.26
RAB4AP20338 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
RAB4AP20338 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB4AP20338 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.4□□□□□ -0.26
RAB4AP20338 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB4AP20338 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
RAB4AP20338 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB4AP20338 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB4AP20338 DBET-201ENST00000630918 3363 ntBASIC13.4□□□□□ -0.26
RAB4AP20338 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB4AP20338 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
RAB4AP20338 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 KRT8P3-201ENST00000519669 1449 ntBASIC13.39□□□□□ -0.27
RAB4AP20338 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 AC093010.1-201ENST00000473625 1624 ntBASIC13.39□□□□□ -0.27
RAB4AP20338 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 AL023775.1-201ENST00000454907 1746 ntBASIC13.39□□□□□ -0.27
RAB4AP20338 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RAB4AP20338 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RAB4AP20338 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 KRT18P5-201ENST00000436075 1291 ntBASIC13.39□□□□□ -0.27
RAB4AP20338 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.39□□□□□ -0.27
RAB4AP20338 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
RAB4AP20338 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
RAB4AP20338 AC120498.8-201ENST00000614275 531 ntBASIC13.39□□□□□ -0.27
RAB4AP20338 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB4AP20338 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB4AP20338 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB4AP20338 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB4AP20338 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms