Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 VENTXP5-201ENST00000523979 775 ntBASIC16.23■□□□□ 0.19
TNFRSF1BP20333 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TNFRSF1BP20333 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 RNF216P1-203ENST00000404404 2427 ntBASIC16.22■□□□□ 0.19
TNFRSF1BP20333 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 FAM8A6P-201ENST00000407496 1135 ntBASIC16.22■□□□□ 0.19
TNFRSF1BP20333 AC117947.1-201ENST00000427448 529 ntBASIC16.22■□□□□ 0.19
TNFRSF1BP20333 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 GPR32P1-201ENST00000601788 811 ntBASIC16.22■□□□□ 0.19
TNFRSF1BP20333 AL031432.5-201ENST00000641059 760 ntBASIC16.22■□□□□ 0.19
TNFRSF1BP20333 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.22■□□□□ 0.19
TNFRSF1BP20333 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.22■□□□□ 0.19
TNFRSF1BP20333 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 AC092171.3-201ENST00000610122 2651 ntBASIC16.21■□□□□ 0.19
TNFRSF1BP20333 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 MIR662-201ENST00000384847 95 ntBASIC16.21■□□□□ 0.19
TNFRSF1BP20333 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.21■□□□□ 0.19
TNFRSF1BP20333 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms