Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.52■□□□□ 0.23
NCK1P16333 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NCK1P16333 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCK1P16333 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCK1P16333 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.52■□□□□ 0.23
NCK1P16333 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NCK1P16333 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCK1P16333 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.51■□□□□ 0.23
NCK1P16333 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
NCK1P16333 AC078925.2-201ENST00000624013 1973 ntBASIC16.51■□□□□ 0.23
NCK1P16333 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
NCK1P16333 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.51■□□□□ 0.23
NCK1P16333 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NCK1P16333 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.51■□□□□ 0.23
NCK1P16333 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.51■□□□□ 0.23
NCK1P16333 SLC25A1P3-201ENST00000395415 828 ntBASIC16.51■□□□□ 0.23
NCK1P16333 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
NCK1P16333 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.51■□□□□ 0.23
NCK1P16333 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
NCK1P16333 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.51■□□□□ 0.23
NCK1P16333 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.51■□□□□ 0.23
NCK1P16333 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NCK1P16333 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.51■□□□□ 0.23
NCK1P16333 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NCK1P16333 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.51■□□□□ 0.23
NCK1P16333 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NCK1P16333 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 AL662844.4-201ENST00000606367 2838 ntBASIC16.51■□□□□ 0.23
NCK1P16333 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCK1P16333 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NCK1P16333 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NCK1P16333 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.5■□□□□ 0.23
NCK1P16333 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
NCK1P16333 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 AL139327.4-201ENST00000612362 153 ntBASIC16.5■□□□□ 0.23
NCK1P16333 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
NCK1P16333 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.5■□□□□ 0.23
NCK1P16333 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NCK1P16333 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NCK1P16333 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.49■□□□□ 0.23
NCK1P16333 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NCK1P16333 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NCK1P16333 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms