Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC172P0C7W6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.9■□□□□ 0.62
CCDC172P0C7W6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.9■□□□□ 0.62
CCDC172P0C7W6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC172P0C7W6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC172P0C7W6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC172P0C7W6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.89■□□□□ 0.62
CCDC172P0C7W6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CCDC172P0C7W6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC172P0C7W6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.89■□□□□ 0.61
CCDC172P0C7W6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 RNF126P1-202ENST00000569893 925 ntBASIC18.89■□□□□ 0.61
CCDC172P0C7W6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC172P0C7W6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 AC104076.2-201ENST00000448912 469 ntBASIC18.88■□□□□ 0.61
CCDC172P0C7W6 AL671277.2-201ENST00000458060 996 ntBASIC18.88■□□□□ 0.61
CCDC172P0C7W6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC172P0C7W6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 AL645929.1-201ENST00000420084 975 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms