Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.94■□□□□ 0.94
APPP05067 MYCLP1-201ENST00000372451 1075 ntBASIC20.94■□□□□ 0.94
APPP05067 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.94■□□□□ 0.94
APPP05067 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.94■□□□□ 0.94
APPP05067 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.94■□□□□ 0.94
APPP05067 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.94■□□□□ 0.94
APPP05067 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.94■□□□□ 0.94
APPP05067 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
APPP05067 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.94■□□□□ 0.94
APPP05067 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
APPP05067 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
APPP05067 HLA-J-201ENST00000462773 1622 ntBASIC20.93■□□□□ 0.94
APPP05067 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.93■□□□□ 0.94
APPP05067 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.93■□□□□ 0.94
APPP05067 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 AC003669.1-201ENST00000334569 611 ntBASIC20.93■□□□□ 0.94
APPP05067 SPDYE21P-201ENST00000413323 827 ntBASIC20.93■□□□□ 0.94
APPP05067 AL020989.1-201ENST00000422979 469 ntBASIC20.93■□□□□ 0.94
APPP05067 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
APPP05067 RNPS1P1-201ENST00000507437 918 ntBASIC20.93■□□□□ 0.94
APPP05067 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 AC073648.2-201ENST00000510116 352 ntBASIC20.93■□□□□ 0.94
APPP05067 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.93■□□□□ 0.94
APPP05067 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
APPP05067 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.93■□□□□ 0.94
APPP05067 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.93■□□□□ 0.94
APPP05067 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.93■□□□□ 0.94
APPP05067 STK25P1-201ENST00000585406 838 ntBASIC20.93■□□□□ 0.94
APPP05067 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.93■□□□□ 0.94
APPP05067 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.93■□□□□ 0.94
APPP05067 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.93■□□□□ 0.94
APPP05067 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.93■□□□□ 0.94
APPP05067 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.93■□□□□ 0.94
APPP05067 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.93■□□□□ 0.94
APPP05067 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.93■□□□□ 0.94
APPP05067 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
APPP05067 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.92■□□□□ 0.94
APPP05067 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
APPP05067 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.92■□□□□ 0.94
APPP05067 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APPP05067 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APPP05067 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.92■□□□□ 0.94
APPP05067 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.92■□□□□ 0.94
APPP05067 MRPL3P1-201ENST00000400109 1033 ntBASIC20.92■□□□□ 0.94
APPP05067 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
APPP05067 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
APPP05067 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
APPP05067 AF186996.4-201ENST00000467186 377 ntBASIC20.92■□□□□ 0.94
APPP05067 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
APPP05067 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.92■□□□□ 0.94
APPP05067 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.92■□□□□ 0.94
APPP05067 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.92■□□□□ 0.94
APPP05067 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.92■□□□□ 0.94
APPP05067 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
APPP05067 AL139288.1-201ENST00000623748 933 ntBASIC20.92■□□□□ 0.94
APPP05067 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
APPP05067 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
APPP05067 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APPP05067 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APPP05067 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APPP05067 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.92■□□□□ 0.94
APPP05067 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.92■□□□□ 0.94
APPP05067 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
APPP05067 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
APPP05067 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
APPP05067 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APPP05067 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APPP05067 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APPP05067 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APPP05067 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APPP05067 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.91■□□□□ 0.94
APPP05067 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
APPP05067 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.91■□□□□ 0.94
APPP05067 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
APPP05067 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
APPP05067 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APPP05067 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
APPP05067 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APPP05067 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms