Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTN3O95197 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.4■□□□□ 0.54
RTN3O95197 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN3O95197 AL022342.1-201ENST00000400363 863 ntBASIC18.4■□□□□ 0.54
RTN3O95197 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.4■□□□□ 0.54
RTN3O95197 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RTN3O95197 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.4■□□□□ 0.54
RTN3O95197 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.4■□□□□ 0.54
RTN3O95197 AC008735.5-201ENST00000623544 497 ntBASIC18.4■□□□□ 0.54
RTN3O95197 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 IL9RP2-201ENST00000423948 1312 ntBASIC18.4■□□□□ 0.54
RTN3O95197 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN3O95197 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN3O95197 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RTN3O95197 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTN3O95197 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN3O95197 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN3O95197 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN3O95197 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RTN3O95197 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.39■□□□□ 0.54
RTN3O95197 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.39■□□□□ 0.54
RTN3O95197 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
RTN3O95197 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.39■□□□□ 0.54
RTN3O95197 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTN3O95197 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RTN3O95197 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RTN3O95197 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN3O95197 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RTN3O95197 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN3O95197 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN3O95197 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN3O95197 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN3O95197 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN3O95197 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RTN3O95197 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN3O95197 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.39■□□□□ 0.53
RTN3O95197 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN3O95197 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN3O95197 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.39■□□□□ 0.53
RTN3O95197 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN3O95197 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RTN3O95197 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.39■□□□□ 0.53
RTN3O95197 AL049840.3-201ENST00000602669 611 ntBASIC18.39■□□□□ 0.53
RTN3O95197 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN3O95197 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.39■□□□□ 0.53
RTN3O95197 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RTN3O95197 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTN3O95197 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN3O95197 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RTN3O95197 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN3O95197 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN3O95197 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN3O95197 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTN3O95197 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTN3O95197 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN3O95197 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN3O95197 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
RTN3O95197 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTN3O95197 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN3O95197 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
RTN3O95197 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RTN3O95197 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.38■□□□□ 0.53
RTN3O95197 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.38■□□□□ 0.53
RTN3O95197 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.38■□□□□ 0.53
RTN3O95197 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN3O95197 AL589182.2-201ENST00000619332 1049 ntBASIC18.38■□□□□ 0.53
RTN3O95197 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN3O95197 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.38■□□□□ 0.53
RTN3O95197 LINC01451-201ENST00000623792 534 ntBASIC18.38■□□□□ 0.53
RTN3O95197 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTN3O95197 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN3O95197 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN3O95197 AC243591.1-201ENST00000452967 1364 ntBASIC18.38■□□□□ 0.53
RTN3O95197 AC004817.3-201ENST00000602957 2129 ntBASIC18.38■□□□□ 0.53
RTN3O95197 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.38■□□□□ 0.53
RTN3O95197 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN3O95197 AC009336.1-201ENST00000608941 1553 ntBASIC18.38■□□□□ 0.53
RTN3O95197 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
RTN3O95197 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTN3O95197 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RTN3O95197 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.37■□□□□ 0.53
RTN3O95197 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN3O95197 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.37■□□□□ 0.53
RTN3O95197 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.37■□□□□ 0.53
RTN3O95197 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTN3O95197 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms