Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN11O75508 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN11O75508 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CLDN11O75508 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN11O75508 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN11O75508 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN11O75508 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CLDN11O75508 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN11O75508 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN11O75508 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.79■□□□□ 0.44
CLDN11O75508 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN11O75508 AC073621.1-201ENST00000392730 636 ntBASIC17.79■□□□□ 0.44
CLDN11O75508 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN11O75508 AL590627.1-203ENST00000421194 1026 ntBASIC17.79■□□□□ 0.44
CLDN11O75508 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN11O75508 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN11O75508 PGM5P2-202ENST00000637225 1043 ntBASIC17.79■□□□□ 0.44
CLDN11O75508 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN11O75508 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN11O75508 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 AC016396.2-201ENST00000562575 1417 ntBASIC17.79■□□□□ 0.44
CLDN11O75508 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN11O75508 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN11O75508 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN11O75508 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN11O75508 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN11O75508 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN11O75508 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN11O75508 IL9RP2-201ENST00000423948 1312 ntBASIC17.78■□□□□ 0.44
CLDN11O75508 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN11O75508 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN11O75508 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN11O75508 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLDN11O75508 AP002414.3-201ENST00000589352 1468 ntBASIC17.78■□□□□ 0.44
CLDN11O75508 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN11O75508 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN11O75508 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN11O75508 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN11O75508 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN11O75508 AC092910.1-201ENST00000482027 1129 ntBASIC17.78■□□□□ 0.44
CLDN11O75508 AC136632.2-201ENST00000512891 861 ntBASIC17.78■□□□□ 0.44
CLDN11O75508 AL356488.2-201ENST00000602755 427 ntBASIC17.78■□□□□ 0.44
CLDN11O75508 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CLDN11O75508 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN11O75508 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN11O75508 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN11O75508 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN11O75508 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN11O75508 OR6D1P-202ENST00000641007 5290 ntBASIC17.78■□□□□ 0.44
CLDN11O75508 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDN11O75508 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN11O75508 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN11O75508 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN11O75508 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLDN11O75508 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLDN11O75508 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CLDN11O75508 GPR89P-201ENST00000407924 1495 ntBASIC17.77■□□□□ 0.44
CLDN11O75508 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLDN11O75508 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN11O75508 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN11O75508 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN11O75508 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN11O75508 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN11O75508 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN11O75508 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN11O75508 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN11O75508 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN11O75508 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN11O75508 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN11O75508 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN11O75508 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.77■□□□□ 0.44
CLDN11O75508 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN11O75508 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN11O75508 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN11O75508 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN11O75508 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.77■□□□□ 0.43
CLDN11O75508 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN11O75508 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN11O75508 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms