Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.77■□□□□ 0.28
PRAMEF4O60810 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PRAMEF4O60810 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PRAMEF4O60810 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PRAMEF4O60810 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEF4O60810 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEF4O60810 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.77■□□□□ 0.27
PRAMEF4O60810 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.77■□□□□ 0.27
PRAMEF4O60810 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEF4O60810 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEF4O60810 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEF4O60810 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEF4O60810 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PRAMEF4O60810 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PRAMEF4O60810 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 AD000864.1-201ENST00000624076 2295 ntBASIC16.76■□□□□ 0.27
PRAMEF4O60810 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 FOSL1P1-201ENST00000511041 816 ntBASIC16.76■□□□□ 0.27
PRAMEF4O60810 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 PRORSD1P-202ENST00000563365 2154 ntBASIC16.76■□□□□ 0.27
PRAMEF4O60810 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF4O60810 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEF4O60810 LINC02012-201ENST00000608206 1725 ntBASIC16.76■□□□□ 0.27
PRAMEF4O60810 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 AC003669.1-201ENST00000334569 611 ntBASIC16.75■□□□□ 0.27
PRAMEF4O60810 KLF4P1-201ENST00000412782 1185 ntBASIC16.75■□□□□ 0.27
PRAMEF4O60810 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 HCG4P8-203ENST00000443049 980 ntBASIC16.75■□□□□ 0.27
PRAMEF4O60810 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
PRAMEF4O60810 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEF4O60810 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.74■□□□□ 0.27
PRAMEF4O60810 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PRAMEF4O60810 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms