Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
DCXO43602 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.43■□□□□ 0.54
DCXO43602 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DCXO43602 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
DCXO43602 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DCXO43602 AC020916.1-201ENST00000587762 1774 ntBASIC18.42■□□□□ 0.54
DCXO43602 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
DCXO43602 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.42■□□□□ 0.54
DCXO43602 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.42■□□□□ 0.54
DCXO43602 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DCXO43602 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DCXO43602 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DCXO43602 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
DCXO43602 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.42■□□□□ 0.54
DCXO43602 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.42■□□□□ 0.54
DCXO43602 ACTG1P14-201ENST00000446382 1122 ntBASIC18.42■□□□□ 0.54
DCXO43602 RNA5SP421-201ENST00000516864 134 ntBASIC18.42■□□□□ 0.54
DCXO43602 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.42■□□□□ 0.54
DCXO43602 AC005225.4-201ENST00000557330 545 ntBASIC18.42■□□□□ 0.54
DCXO43602 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.42■□□□□ 0.54
DCXO43602 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.42■□□□□ 0.54
DCXO43602 AC004835.2-201ENST00000603762 682 ntBASIC18.42■□□□□ 0.54
DCXO43602 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.42■□□□□ 0.54
DCXO43602 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.42■□□□□ 0.54
DCXO43602 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DCXO43602 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.42■□□□□ 0.54
DCXO43602 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
DCXO43602 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DCXO43602 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.42■□□□□ 0.54
DCXO43602 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.42■□□□□ 0.54
DCXO43602 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.42■□□□□ 0.54
DCXO43602 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.41■□□□□ 0.54
DCXO43602 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.41■□□□□ 0.54
DCXO43602 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DCXO43602 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.41■□□□□ 0.54
DCXO43602 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
DCXO43602 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DCXO43602 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
DCXO43602 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.41■□□□□ 0.54
DCXO43602 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
DCXO43602 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
DCXO43602 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.41■□□□□ 0.54
DCXO43602 PMS2P4-201ENST00000412466 1052 ntBASIC18.41■□□□□ 0.54
DCXO43602 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.41■□□□□ 0.54
DCXO43602 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
DCXO43602 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.41■□□□□ 0.54
DCXO43602 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.41■□□□□ 0.54
DCXO43602 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.41■□□□□ 0.54
DCXO43602 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 AC073592.3-201ENST00000625118 1834 ntBASIC18.41■□□□□ 0.54
DCXO43602 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DCXO43602 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.41■□□□□ 0.54
DCXO43602 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCXO43602 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
DCXO43602 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.4■□□□□ 0.54
DCXO43602 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.4■□□□□ 0.54
DCXO43602 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
DCXO43602 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCXO43602 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.4■□□□□ 0.54
DCXO43602 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCXO43602 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCXO43602 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
DCXO43602 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCXO43602 HCG4B-203ENST00000450128 991 ntBASIC18.4■□□□□ 0.54
DCXO43602 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.4■□□□□ 0.54
DCXO43602 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.4■□□□□ 0.54
DCXO43602 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.4■□□□□ 0.54
DCXO43602 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.4■□□□□ 0.54
DCXO43602 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
DCXO43602 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
DCXO43602 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCXO43602 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.4■□□□□ 0.54
DCXO43602 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
DCXO43602 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms