Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.19■□□□□ 0.02
XRCC2O43543 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
XRCC2O43543 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 Z69720.1-201ENST00000601483 472 ntBASIC15.19■□□□□ 0.02
XRCC2O43543 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
XRCC2O43543 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
XRCC2O43543 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.19■□□□□ 0.02
XRCC2O43543 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.19■□□□□ 0.02
XRCC2O43543 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
XRCC2O43543 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.18■□□□□ 0.02
XRCC2O43543 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
XRCC2O43543 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 TNRC18P3-201ENST00000441896 2691 ntBASIC15.18■□□□□ 0.02
XRCC2O43543 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
XRCC2O43543 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.18■□□□□ 0.02
XRCC2O43543 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
XRCC2O43543 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.18■□□□□ 0.02
XRCC2O43543 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.18■□□□□ 0.02
XRCC2O43543 AP000550.4-202ENST00000639755 178 ntBASIC15.18■□□□□ 0.02
XRCC2O43543 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.18■□□□□ 0.02
XRCC2O43543 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
XRCC2O43543 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.18■□□□□ 0.02
XRCC2O43543 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.18■□□□□ 0.02
XRCC2O43543 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
XRCC2O43543 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
XRCC2O43543 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.17■□□□□ 0.02
XRCC2O43543 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
XRCC2O43543 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.17■□□□□ 0.02
XRCC2O43543 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.17■□□□□ 0.02
XRCC2O43543 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 AC124067.4-201ENST00000519691 2379 ntBASIC15.17■□□□□ 0.02
XRCC2O43543 AC108860.2-201ENST00000562760 2183 ntBASIC15.17■□□□□ 0.02
XRCC2O43543 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
XRCC2O43543 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.17■□□□□ 0.02
XRCC2O43543 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.17■□□□□ 0.02
XRCC2O43543 DRAXINP1-201ENST00000437611 948 ntBASIC15.17■□□□□ 0.02
XRCC2O43543 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.17■□□□□ 0.02
XRCC2O43543 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.17■□□□□ 0.02
XRCC2O43543 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.17■□□□□ 0.02
XRCC2O43543 AC109462.3-201ENST00000573934 613 ntBASIC15.17■□□□□ 0.02
XRCC2O43543 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.17■□□□□ 0.02
XRCC2O43543 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.17■□□□□ 0.02
XRCC2O43543 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.17■□□□□ 0.02
XRCC2O43543 AC019129.2-201ENST00000609837 1235 ntBASIC15.17■□□□□ 0.02
XRCC2O43543 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.17■□□□□ 0.02
XRCC2O43543 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
XRCC2O43543 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.17■□□□□ 0.02
XRCC2O43543 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.17■□□□□ 0.02
XRCC2O43543 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
XRCC2O43543 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
XRCC2O43543 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms