Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.74■□□□□ 0.11
CCRL2O00421 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.74■□□□□ 0.11
CCRL2O00421 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CCRL2O00421 MIR6786-201ENST00000616843 113 ntBASIC15.74■□□□□ 0.11
CCRL2O00421 CR392000.1-201ENST00000624770 1228 ntBASIC15.74■□□□□ 0.11
CCRL2O00421 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.74■□□□□ 0.11
CCRL2O00421 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.74■□□□□ 0.11
CCRL2O00421 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
CCRL2O00421 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CCRL2O00421 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
CCRL2O00421 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.74■□□□□ 0.11
CCRL2O00421 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.74■□□□□ 0.11
CCRL2O00421 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCRL2O00421 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCRL2O00421 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 AC092068.3-201ENST00000587894 2016 ntBASIC15.73■□□□□ 0.11
CCRL2O00421 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 AC022188.1-201ENST00000620960 1664 ntBASIC15.73■□□□□ 0.11
CCRL2O00421 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCRL2O00421 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.73■□□□□ 0.11
CCRL2O00421 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.73■□□□□ 0.11
CCRL2O00421 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.73■□□□□ 0.11
CCRL2O00421 FAM197Y4-202ENST00000622692 608 ntBASIC15.73■□□□□ 0.11
CCRL2O00421 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.73■□□□□ 0.11
CCRL2O00421 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.73■□□□□ 0.11
CCRL2O00421 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCRL2O00421 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCRL2O00421 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.73■□□□□ 0.11
CCRL2O00421 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 AC096733.2-201ENST00000609937 1394 ntBASIC15.73■□□□□ 0.11
CCRL2O00421 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCRL2O00421 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.72■□□□□ 0.11
CCRL2O00421 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCRL2O00421 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCRL2O00421 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.72■□□□□ 0.11
CCRL2O00421 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CCRL2O00421 AL513523.2-202ENST00000427283 2040 ntBASIC15.72■□□□□ 0.11
CCRL2O00421 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CCRL2O00421 AL353807.1-201ENST00000427475 662 ntBASIC15.72■□□□□ 0.11
CCRL2O00421 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.72■□□□□ 0.11
CCRL2O00421 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.72■□□□□ 0.11
CCRL2O00421 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 RPPH1-201ENST00000516869 333 ntBASIC15.72■□□□□ 0.11
CCRL2O00421 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.72■□□□□ 0.11
CCRL2O00421 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.72■□□□□ 0.11
CCRL2O00421 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 AC046185.3-201ENST00000623228 1824 ntBASIC15.72■□□□□ 0.11
CCRL2O00421 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.72■□□□□ 0.11
CCRL2O00421 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCRL2O00421 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms