Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX39AO00148 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DDX39AO00148 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX39AO00148 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDX39AO00148 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX39AO00148 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DDX39AO00148 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDX39AO00148 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX39AO00148 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.63■□□□□ 0.73
DDX39AO00148 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DDX39AO00148 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.62■□□□□ 0.73
DDX39AO00148 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX39AO00148 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 AC067852.2-201ENST00000590513 2313 ntBASIC19.62■□□□□ 0.73
DDX39AO00148 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
DDX39AO00148 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX39AO00148 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX39AO00148 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX39AO00148 LINC01451-201ENST00000623792 534 ntBASIC19.62■□□□□ 0.73
DDX39AO00148 AC117500.6-201ENST00000624871 588 ntBASIC19.62■□□□□ 0.73
DDX39AO00148 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
DDX39AO00148 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
DDX39AO00148 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
DDX39AO00148 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX39AO00148 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX39AO00148 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX39AO00148 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX39AO00148 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX39AO00148 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX39AO00148 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX39AO00148 AC104109.2-201ENST00000602919 1418 ntBASIC19.61■□□□□ 0.73
DDX39AO00148 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX39AO00148 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX39AO00148 AC046185.3-201ENST00000623228 1824 ntBASIC19.61■□□□□ 0.73
DDX39AO00148 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.61■□□□□ 0.73
DDX39AO00148 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
DDX39AO00148 ELK2BP-201ENST00000415014 1224 ntBASIC19.61■□□□□ 0.73
DDX39AO00148 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.61■□□□□ 0.73
DDX39AO00148 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DDX39AO00148 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX39AO00148 AL356488.2-201ENST00000602755 427 ntBASIC19.61■□□□□ 0.73
DDX39AO00148 AL671883.3-201ENST00000603274 991 ntBASIC19.61■□□□□ 0.73
DDX39AO00148 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
DDX39AO00148 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX39AO00148 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX39AO00148 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX39AO00148 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX39AO00148 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX39AO00148 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX39AO00148 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX39AO00148 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DDX39AO00148 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DDX39AO00148 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.6■□□□□ 0.73
DDX39AO00148 OR6D1P-202ENST00000641007 5290 ntBASIC19.6■□□□□ 0.73
DDX39AO00148 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX39AO00148 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX39AO00148 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX39AO00148 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX39AO00148 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DDX39AO00148 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX39AO00148 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX39AO00148 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX39AO00148 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX39AO00148 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX39AO00148 MIR940-201ENST00000401276 94 ntBASIC19.6■□□□□ 0.73
DDX39AO00148 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.6■□□□□ 0.73
DDX39AO00148 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.6■□□□□ 0.73
DDX39AO00148 IGHV3-22-201ENST00000520721 359 ntBASIC19.6■□□□□ 0.73
DDX39AO00148 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX39AO00148 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DDX39AO00148 AC006557.2-201ENST00000592985 1240 ntBASIC19.6■□□□□ 0.73
DDX39AO00148 AL139327.4-201ENST00000612362 153 ntBASIC19.6■□□□□ 0.73
DDX39AO00148 AL589182.2-201ENST00000619332 1049 ntBASIC19.6■□□□□ 0.73
DDX39AO00148 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX39AO00148 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX39AO00148 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
DDX39AO00148 AC006504.4-201ENST00000592118 1568 ntBASIC19.6■□□□□ 0.73
DDX39AO00148 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX39AO00148 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DDX39AO00148 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX39AO00148 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX39AO00148 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX39AO00148 NCF1C-201ENST00000438382 1427 ntBASIC19.59■□□□□ 0.73
DDX39AO00148 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX39AO00148 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms