Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 BX005266.1-201ENST00000473402 457 ntBASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 POLD2P1-201ENST00000511220 997 ntBASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 AC117500.6-201ENST00000624871 588 ntBASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 AC122714.2-201ENST00000502787 707 ntBASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 TERC-201ENST00000602385 541 ntBASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA3F8WFD2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 AC012640.2-201ENST00000561606 901 ntBASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 AC006538.3-201ENST00000612495 578 ntBASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 AC104109.2-201ENST00000602919 1418 ntBASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 GNAS-203ENST00000306120 1878 ntBASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 SIRPAP1-201ENST00000448467 1770 ntBASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA3F8WFD2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 AC004817.3-201ENST00000602957 2129 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms