Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PGAM5P1-201ENST00000518923 814 ntBASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC006538.3-201ENST00000612495 578 ntBASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 GGTLC5P-201ENST00000617623 998 ntBASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC006116.8-202ENST00000587620 1550 ntBASIC17.45■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 LINC00304-203ENST00000565008 1864 ntBASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PTCHD3P3-201ENST00000403073 906 ntBASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AL135999.2-201ENST00000622438 1686 ntBASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MRPL20P1-201ENST00000400819 433 ntBASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PRSS29P-201ENST00000440800 595 ntBASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms