Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 KRT18P67-201ENST00000432816 1264 ntBASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 AC122714.2-201ENST00000502787 707 ntBASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LRCOL1A6NCL2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LRCOL1A6NCL2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 AF186996.4-201ENST00000467186 377 ntBASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 RNA5SP419-201ENST00000515908 135 ntBASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 AL773604.1-201ENST00000617417 272 ntBASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 AP000867.4-201ENST00000641616 219 ntBASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
LRCOL1A6NCL2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LRCOL1A6NCL2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LRCOL1A6NCL2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LRCOL1A6NCL2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC11.69□□□□□ -0.54
LRCOL1A6NCL2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC11.69□□□□□ -0.54
LRCOL1A6NCL2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LRCOL1A6NCL2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LRCOL1A6NCL2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms