Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
TRDV1A0A1B0GX56 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 AL355802.2-201ENST00000402069 882 ntBASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 RPPH1-201ENST00000516869 333 ntBASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRDV1A0A1B0GX56 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 MST1L-201ENST00000442552 2185 ntBASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 MIR3917-201ENST00000580971 93 ntBASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 AC006058.3-201ENST00000606217 1069 ntBASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 AL662844.4-201ENST00000606367 2838 ntBASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.35■□□□□ 0.05
TRDV1A0A1B0GX56 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRDV1A0A1B0GX56 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRDV1A0A1B0GX56 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRDV1A0A1B0GX56 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRDV1A0A1B0GX56 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRDV1A0A1B0GX56 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRDV1A0A1B0GX56 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRDV1A0A1B0GX56 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRDV1A0A1B0GX56 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms