Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 COX5BP2-201ENST00000392354 334 ntBASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCA3PQ9Y6N3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 AC084018.2-201ENST00000613093 2607 ntBASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 INTS4P1-201ENST00000438455 1935 ntBASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 LINC00896-202ENST00000609602 2128 ntBASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCA3PQ9Y6N3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 AC103564.2-201ENST00000432853 1299 ntBASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 AC122714.2-201ENST00000502787 707 ntBASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms