Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 COPE-202ENST00000349893 948 ntTSL 2 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 KRT8P48-201ENST00000515599 1220 ntBASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 AC109322.1-201ENST00000524499 1264 ntBASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 BSG-214ENST00000614867 960 ntTSL 3 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
SHANK2Q9UPX8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 AL135744.1-201ENST00000565098 629 ntBASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 MIR3909-201ENST00000579518 119 ntBASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 CD99-202ENST00000381180 530 ntTSL 2 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 AC109635.5-201ENST00000533593 962 ntBASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 RARRES2P8-201ENST00000566335 367 ntBASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 AC026120.1-201ENST00000611536 926 ntBASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHANK2Q9UPX8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 AL355312.1-201ENST00000407115 2176 ntBASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 AF228730.6-201ENST00000641497 218 ntBASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 AC084121.3-201ENST00000641716 218 ntBASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 AC105233.6-201ENST00000642093 218 ntBASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHANK2Q9UPX8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
SHANK2Q9UPX8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.64■■□□□ 1.7
SHANK2Q9UPX8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SHANK2Q9UPX8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SHANK2Q9UPX8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
SHANK2Q9UPX8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SHANK2Q9UPX8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SHANK2Q9UPX8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SHANK2Q9UPX8 AC005034.1-201ENST00000426657 489 ntBASIC25.64■■□□□ 1.69
SHANK2Q9UPX8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC25.64■■□□□ 1.69
SHANK2Q9UPX8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SHANK2Q9UPX8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC25.64■■□□□ 1.69
SHANK2Q9UPX8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC25.64■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms