Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 AC020916.1-201ENST00000587762 1774 ntBASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 RBM17P3-201ENST00000417687 1192 ntBASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 AL355877.3-201ENST00000622820 899 ntBASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 AC022211.2-201ENST00000585075 2527 ntBASIC19.38■□□□□ 0.69
BLOC1S4Q9NUP1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 SIGLEC30P-201ENST00000455569 941 ntBASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 FGFR3P6-201ENST00000457012 610 ntBASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 AF238378.1-201ENST00000526806 358 ntBASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 MTDHP3-201ENST00000594186 672 ntBASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 IFNL4P1-201ENST00000607083 540 ntBASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 LINC02012-201ENST00000608206 1725 ntBASIC19.37■□□□□ 0.69
BLOC1S4Q9NUP1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms