Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.08■□□□□ 0.96
FOXD4L1Q9NU39 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXD4L1Q9NU39 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
FOXD4L1Q9NU39 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXD4L1Q9NU39 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
FOXD4L1Q9NU39 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 AC060834.1-201ENST00000443027 2032 ntBASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 AL157385.1-201ENST00000446973 268 ntBASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 FITM1-202ENST00000559294 800 ntBASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 MIR3180-4-201ENST00000582223 153 ntBASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 PCDHA14-201ENST00000506751 2298 ntBASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
FOXD4L1Q9NU39 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 AGGF1P2-201ENST00000426656 2106 ntBASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXD4L1Q9NU39 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 PCDHB19P-201ENST00000570871 2371 ntBASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 AC022898.2-201ENST00000616822 1312 ntBASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 AL121761.2-201ENST00000598007 1648 ntBASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms