Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17■□□□□ 0.31
THSD1Q9NS62 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17■□□□□ 0.31
THSD1Q9NS62 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17■□□□□ 0.31
THSD1Q9NS62 MIR1199-201ENST00000621445 119 ntBASIC17■□□□□ 0.31
THSD1Q9NS62 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
THSD1Q9NS62 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17■□□□□ 0.31
THSD1Q9NS62 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
THSD1Q9NS62 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
THSD1Q9NS62 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
THSD1Q9NS62 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17■□□□□ 0.31
THSD1Q9NS62 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
THSD1Q9NS62 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17■□□□□ 0.31
THSD1Q9NS62 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
THSD1Q9NS62 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
THSD1Q9NS62 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
THSD1Q9NS62 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 SDHAP2-201ENST00000455183 2001 ntBASIC16.99■□□□□ 0.31
THSD1Q9NS62 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.99■□□□□ 0.31
THSD1Q9NS62 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THSD1Q9NS62 AP002414.3-201ENST00000589352 1468 ntBASIC16.99■□□□□ 0.31
THSD1Q9NS62 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.98■□□□□ 0.31
THSD1Q9NS62 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 AC211486.1-202ENST00000416371 468 ntBASIC16.98■□□□□ 0.31
THSD1Q9NS62 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 DNAJB3-202ENST00000449667 1266 ntBASIC16.98■□□□□ 0.31
THSD1Q9NS62 AC211476.1-201ENST00000503899 468 ntBASIC16.98■□□□□ 0.31
THSD1Q9NS62 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 PGM5P2-202ENST00000637225 1043 ntBASIC16.98■□□□□ 0.31
THSD1Q9NS62 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.98■□□□□ 0.31
THSD1Q9NS62 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THSD1Q9NS62 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
THSD1Q9NS62 AC022898.2-201ENST00000616822 1312 ntBASIC16.97■□□□□ 0.31
THSD1Q9NS62 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
THSD1Q9NS62 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
THSD1Q9NS62 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
THSD1Q9NS62 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms