Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC52A3Q9NQ40 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 AL391005.1-201ENST00000623953 2435 ntBASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 CICP6-201ENST00000457191 2729 ntBASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 AC087499.1-201ENST00000418141 1075 ntBASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 AC139887.4-201ENST00000607877 719 ntBASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 AL353801.3-201ENST00000609898 542 ntBASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 AC073508.3-201ENST00000619697 1419 ntBASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC52A3Q9NQ40 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 SPDYE13P-201ENST00000445314 798 ntBASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 AC122714.2-201ENST00000502787 707 ntBASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 VENTXP5-201ENST00000523979 775 ntBASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 AC125634.1-201ENST00000438758 1403 ntBASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms