Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 AC139713.2-201ENST00000641328 2723 ntBASIC15.3■□□□□ 0.04
CDH20Q9HBT6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 PRORSD1P-202ENST00000563365 2154 ntBASIC15.3■□□□□ 0.04
CDH20Q9HBT6 MIR5100-201ENST00000579544 119 ntBASIC15.3■□□□□ 0.04
CDH20Q9HBT6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 LINC01451-201ENST00000623792 534 ntBASIC15.3■□□□□ 0.04
CDH20Q9HBT6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDH20Q9HBT6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 INTS4P1-201ENST00000438455 1935 ntBASIC15.29■□□□□ 0.04
CDH20Q9HBT6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 KRT18P31-201ENST00000506277 1292 ntBASIC15.29■□□□□ 0.04
CDH20Q9HBT6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH20Q9HBT6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH20Q9HBT6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms