Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 AL031133.1-201ENST00000406807 723 ntBASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 BX276092.5-203ENST00000456199 560 ntBASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 AL590326.2-201ENST00000625139 305 ntBASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 AC097374.2-201ENST00000618617 1306 ntBASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 VENTXP7-201ENST00000475503 772 ntBASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 AC087388.1-201ENST00000571370 1112 ntBASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 AL121672.3-201ENST00000608644 468 ntBASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC68Q9H2F9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 PP12613-201ENST00000424958 2230 ntBASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC68Q9H2F9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms