Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.71■■□□□ 1.231e-6■■□□□ 14.2
XRN2Q9H0D6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.731e-6■■□□□ 14.2
XRN2Q9H0D6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.26■□□□□ 0.031e-6■■□□□ 14.2
XRN2Q9H0D6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.111e-6■■□□□ 14.2
XRN2Q9H0D6 RPS27A-203ENST00000404735 796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.341e-6■■□□□ 14.2
XRN2Q9H0D6 RPS27A-209ENST00000494756 535 ntTSL 212.95□□□□□ -0.341e-6■■□□□ 14.2
XRN2Q9H0D6 RPS27A-202ENST00000402285 705 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.531e-6■■□□□ 14.2
XRN2Q9H0D6 NOC2L-203ENST00000477976 4201 ntTSL 511.49□□□□□ -0.571e-6■■□□□ 14.2
XRN2Q9H0D6 RPS27A-206ENST00000468810 597 ntTSL 311.28□□□□□ -0.61e-6■■□□□ 14.2
XRN2Q9H0D6 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC10.95□□□□□ -0.661e-6■■□□□ 14.2
XRN2Q9H0D6 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC10.54□□□□□ -0.721e-6■■□□□ 14.2
XRN2Q9H0D6 TUBB-205ENST00000327892 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.871e-6■■□□□ 14.2
XRN2Q9H0D6 RPS27A-207ENST00000471772 557 ntTSL 29.2□□□□□ -0.941e-6■■□□□ 14.2
XRN2Q9H0D6 RPS27A-210ENST00000495843 1159 ntTSL 58.95□□□□□ -0.981e-6■■□□□ 14.2
XRN2Q9H0D6 RPS27A-204ENST00000449323 422 ntTSL 34.56□□□□□ -1.681e-6■■□□□ 14.2
XRN2Q9H0D6 RPS27A-208ENST00000478196 580 ntTSL 24.56□□□□□ -1.681e-6■■□□□ 14.2
XRN2Q9H0D6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.8■■□□□ 1.241e-7■■□□□ 14.2
XRN2Q9H0D6 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC13.08□□□□□ -0.321e-7■■□□□ 14.2
XRN2Q9H0D6 LINC00511-214ENST00000581801 379 ntTSL 312.83□□□□□ -0.361e-7■■□□□ 14.2
XRN2Q9H0D6 LINC00511-210ENST00000580861 467 ntTSL 410.18□□□□□ -0.781e-7■■□□□ 14.2
XRN2Q9H0D6 SEPT9-210ENST00000585929 906 ntTSL 417.69■□□□□ 0.421e-6■■□□□ 14.2
XRN2Q9H0D6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.57■□□□□ 0.41e-6■■□□□ 14.2
XRN2Q9H0D6 SEPT9-213ENST00000586433 569 ntTSL 414.25□□□□□ -0.131e-6■■□□□ 14.2
XRN2Q9H0D6 SEPT9-234ENST00000590938 611 ntTSL 412.02□□□□□ -0.491e-6■■□□□ 14.2
XRN2Q9H0D6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.43■□□□□ 0.862e-6■■□□□ 14.2
XRN2Q9H0D6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.272e-6■■□□□ 14.2
XRN2Q9H0D6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.83■□□□□ 0.122e-6■■□□□ 14.2
XRN2Q9H0D6 TRAF4-204ENST00000422344 631 ntTSL 326.03■■□□□ 1.769e-7■■□□□ 14.2
XRN2Q9H0D6 TRAF4-210ENST00000475329 544 ntTSL 314.82□□□□□ -0.049e-7■■□□□ 14.2
XRN2Q9H0D6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.14■□□□□ 0.972e-10■■□□□ 14.2
XRN2Q9H0D6 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC14.87□□□□□ -0.032e-10■■□□□ 14.2
XRN2Q9H0D6 DHRS3-203ENST00000482265 1036 ntTSL 317.6■□□□□ 0.415e-7■■□□□ 14.2
XRN2Q9H0D6 VASP-202ENST00000586014 1725 ntTSL 521.72■■□□□ 1.072e-10■■□□□ 14.2
XRN2Q9H0D6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.282e-10■■□□□ 14.2
XRN2Q9H0D6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.292e-6■■□□□ 14.2
XRN2Q9H0D6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.742e-16■■□□□ 14.2
XRN2Q9H0D6 HNRNPH3-207ENST00000480987 752 ntTSL 415.62■□□□□ 0.092e-16■■□□□ 14.2
XRN2Q9H0D6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.122e-16■■□□□ 14.2
XRN2Q9H0D6 HNRNPH3-205ENST00000469172 3356 ntTSL 210.52□□□□□ -0.732e-16■■□□□ 14.2
XRN2Q9H0D6 HNRNPH3-203ENST00000461310 648 ntTSL 59.72□□□□□ -0.852e-16■■□□□ 14.2
XRN2Q9H0D6 HNRNPH3-209ENST00000486854 635 ntTSL 27.82□□□□□ -1.162e-16■■□□□ 14.2
XRN2Q9H0D6 HNRNPH3-204ENST00000467249 566 ntTSL 27.22□□□□□ -1.252e-16■■□□□ 14.2
XRN2Q9H0D6 FAM178B-205ENST00000494172 592 ntTSL 321.04■□□□□ 0.968e-9■■□□□ 14.2
XRN2Q9H0D6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.123e-6■■□□□ 14.2
XRN2Q9H0D6 NOP16-204ENST00000504821 544 ntTSL 530.87■■■□□ 2.535e-6■■□□□ 14.2
XRN2Q9H0D6 NOP16-203ENST00000503849 582 ntTSL 225.27■■□□□ 1.645e-6■■□□□ 14.2
XRN2Q9H0D6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.18■■□□□ 1.626e-33■■□□□ 14.2
XRN2Q9H0D6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.366e-33■■□□□ 14.2
XRN2Q9H0D6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.04■■□□□ 1.286e-33■■□□□ 14.2
XRN2Q9H0D6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.33■■□□□ 1.015e-6■■□□□ 14.2
XRN2Q9H0D6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.52■□□□□ 0.886e-33■■□□□ 14.2
XRN2Q9H0D6 RPS15-211ENST00000592700 1602 ntTSL 220.42■□□□□ 0.866e-33■■□□□ 14.2
XRN2Q9H0D6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.41■□□□□ 0.545e-6■■□□□ 14.2
XRN2Q9H0D6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.39■□□□□ 0.536e-33■■□□□ 14.2
XRN2Q9H0D6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.372e-7■■□□□ 14.2
XRN2Q9H0D6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.29■□□□□ 0.366e-33■■□□□ 14.2
XRN2Q9H0D6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.366e-33■■□□□ 14.2
XRN2Q9H0D6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.29■□□□□ 0.366e-33■■□□□ 14.2
XRN2Q9H0D6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.29■□□□□ 0.366e-33■■□□□ 14.2
XRN2Q9H0D6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.68■□□□□ 0.266e-33■■□□□ 14.2
XRN2Q9H0D6 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.44■□□□□ 0.225e-6■■□□□ 14.2
XRN2Q9H0D6 NOP16-210ENST00000619979 963 ntTSL 5 BASIC14.36□□□□□ -0.115e-6■■□□□ 14.2
XRN2Q9H0D6 USP7-208ENST00000563961 4533 ntTSL 514.33□□□□□ -0.122e-7■■□□□ 14.2
XRN2Q9H0D6 NOP16-207ENST00000614830 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.235e-6■■□□□ 14.2
XRN2Q9H0D6 NOP16-202ENST00000502663 551 ntTSL 313.03□□□□□ -0.325e-6■■□□□ 14.2
XRN2Q9H0D6 NOP16-208ENST00000616685 472 ntTSL 3 BASIC12.6□□□□□ -0.395e-6■■□□□ 14.2
XRN2Q9H0D6 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.42e-6■■□□□ 14.2
XRN2Q9H0D6 UBP1-205ENST00000456378 581 ntTSL 428.08■■■□□ 2.096e-13■■□□□ 14.2
XRN2Q9H0D6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.8■■■□□ 2.046e-13■■□□□ 14.2
XRN2Q9H0D6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.496e-13■■□□□ 14.2
XRN2Q9H0D6 MYBBP1A-213ENST00000575662 687 ntTSL 214.66□□□□□ -0.065e-6■■□□□ 14.2
XRN2Q9H0D6 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.299e-7■■□□□ 14.2
XRN2Q9H0D6 UBP1-213ENST00000496310 544 ntTSL 48.98□□□□□ -0.976e-13■■□□□ 14.2
XRN2Q9H0D6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.15□□□□□ -1.435e-6■■□□□ 14.2
XRN2Q9H0D6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.67□□□□□ -1.55e-6■■□□□ 14.2
XRN2Q9H0D6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.765e-6■■□□□ 14.2
XRN2Q9H0D6 AJUBA-207ENST00000555479 558 ntTSL 413.98□□□□□ -0.172e-7■■□□□ 14.2
XRN2Q9H0D6 AJUBA-206ENST00000553911 567 ntTSL 510.35□□□□□ -0.752e-7■■□□□ 14.2
XRN2Q9H0D6 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC9.39□□□□□ -0.912e-7■■□□□ 14.2
XRN2Q9H0D6 AJUBA-208ENST00000556731 651 ntTSL 48.91□□□□□ -0.982e-7■■□□□ 14.2
XRN2Q9H0D6 AJUBA-204ENST00000553592 418 ntTSL 58.91□□□□□ -0.982e-7■■□□□ 14.2
XRN2Q9H0D6 FBXL19-206ENST00000562798 299 ntTSL 421.51■■□□□ 1.037e-7■■□□□ 14.2
XRN2Q9H0D6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.93■■■□□ 2.064e-10■■□□□ 14.1
XRN2Q9H0D6 ARHGDIA-214ENST00000583791 351 ntTSL 223.13■■□□□ 1.294e-10■■□□□ 14.1
XRN2Q9H0D6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.234e-10■■□□□ 14.1
XRN2Q9H0D6 ARHGDIA-205ENST00000579121 637 ntTSL 318.85■□□□□ 0.614e-10■■□□□ 14.1
XRN2Q9H0D6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.557e-14■■□□□ 14.1
XRN2Q9H0D6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.47■□□□□ 0.557e-14■■□□□ 14.1
XRN2Q9H0D6 FTH1-206ENST00000530019 550 ntTSL 418.47■□□□□ 0.557e-14■■□□□ 14.1
XRN2Q9H0D6 FTH1-211ENST00000534719 788 ntTSL 1 (best)16.42■□□□□ 0.227e-14■■□□□ 14.1
XRN2Q9H0D6 FTH1-210ENST00000534180 983 ntTSL 215.93■□□□□ 0.147e-14■■□□□ 14.1
XRN2Q9H0D6 FTH1-205ENST00000529631 507 ntTSL 4 BASIC15.03■□□□□ -07e-14■■□□□ 14.1
XRN2Q9H0D6 FTH1-208ENST00000532829 912 ntTSL 214.07□□□□□ -0.167e-14■■□□□ 14.1
XRN2Q9H0D6 FTH1-209ENST00000533138 885 ntTSL 513.57□□□□□ -0.247e-14■■□□□ 14.1
XRN2Q9H0D6 FTH1-203ENST00000529191 530 ntTSL 2 BASIC13.3□□□□□ -0.287e-14■■□□□ 14.1
XRN2Q9H0D6 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.77e-14■■□□□ 14.1
XRN2Q9H0D6 ARFRP1-211ENST00000618568 1612 ntTSL 322.98■■□□□ 1.273e-7■■□□□ 14.1
XRN2Q9H0D6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.84■□□□□ 0.933e-7■■□□□ 14.1
XRN2Q9H0D6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.593e-7■■□□□ 14.1
XRN2Q9H0D6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.31■■■□□ 2.121e-7■■□□□ 14.1
Retrieved 100 of 21,068 protein–RNA pairs in 97.7 ms